Yea looking at the log it really is more like the tuner used the boost request offset table to change boost requested for the same load, thus the drop in boost request, but the PID does seem to be still active as the post PID value is not just pegged to the base value.
So I suspect it's not a PID timeout as he said it is.
In any case, you're right that it seems to try to bring the boost back but it can't.
When I ran with the waste gate lower chamber disconnected the system held 31 PSI no problem, so I highly doubt it's a boost leak. I also did a smoke test and no boost leak found. If I get off the throttle and back on it then it builds pressure just fine again. So it's possible the tuner really did disable the WGDC output even if the PID is still trying to request it.
This is why I hate using tuners and not tuning my self, because they are so bad at communicating exactly what they are doing. I just wanted this to be quick and work and it didn't turn out that way anyways, and this isn't just some run of the mill tuner, it's one of the best known tuners on the platform (I don't want to bad mouth them so I won't say who). It's also not their fault if the waste gate is defective or something.
So either I think something is strange with the boost box controller (they are supposed to have sent me a replacement board to try but it's been in USPS preshipment for almost 2 wees now), or I think the waste gate has some kind of leak that is happening when the top and bottom pressures are at a higher delta, like air leaking past the diaphragm or something.
I'll see what happens with the Tial MVR, it gets here tomorrow. If that doesn't fix it then I think it's got to be the boost box. So I'll put a manual boost gauge on the bottom port and a vaccum/boost gauge on the top port and see what's actually going on at that point.
Oh and yes I have removed the waste gate twice, and there is not evidence of it hitting like in the other thread. My manifold is the updated one that has it pre-clearanced.